BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D12SP1|AL429398
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1678 1849 0.0
>3x_Contig1678
Length = 12472
Score = 1849 bits (927), Expect = 0.0
Identities = 953/967 (98%)
Strand = Plus / Minus
Query: 1 gttcaggataaagtgtcttatcagaaggtaagtbtcgtgatttggtgttcagctggacaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5355 gttcaggataaagtgtcttatcagaaggtaagtgtcgtgatttggtgttcagctggacaa 5296
Query: 61 atatacatataagctgtttgaagaaaaagggaagaagaaagggaatagacaaagatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 atatacatataagctgtttgaagaaaaagggaagaagaaagggaatagacaaagatccag 5236
Query: 121 acacataattcacgcttcaaagatcgaatgagttaacaagaacaggtctatatgaccgtw 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5235 acacataattcacgcttcaaagatcgaatgagtgaacaagaacaggtctatatgaccgta 5176
Query: 181 aaagtgttatacactctggataatgatccaaattcatttttatcgagatccggtgctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 aaagtgttatacactctggataatgatccaaattcatttttatcgagatccggtgctgtg 5116
Query: 241 gttccagtgactgtcgaacagataccaaatccaaacaacgagaataccacgttgaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 gttccagtgactgtcgaacagataccaaatccaaacaacgagaataccacgttgaaaata 5056
Query: 301 ggtgccgttgaagcggaaaaagtgttgaaacaggtgtgccagtcgtcacccgaacttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 ggtgccgttgaagcggaaaaagtgttgaaacaggtgtgccagtcgtcacccgaacttttc 4996
Query: 361 ccagcttacgatggacagcmagtbatggataagaatgtgaactcggtagatttcaacgtt 420
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4995 ccagcttacgatggacagcaagtgatggataagaatgtgaactcggtagatttcaacgtt 4936
Query: 421 tacgtgaaagatatatgtkaagaggatgaacctttcgtgtctttggggttgctatcaaaa 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 tacgtgaaagatatatgtgaagaggatgaacctttcgtgtctttggggttgctatcaaaa 4876
Query: 481 ctgcgacaagaatcaaatacagaacaaaattacatgatcggacgtgtatgttcgaatttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4875 ctgcgacaagaatcaaatacagaacaaaattacatgatcggacgtgtatgtacgaatttt 4816
Query: 541 gcatcgatgctgccacggtccacgtcgcagatgaactcgttcaacggatttgccagccaa 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4815 gcatcgatgctgcaacggtccacgtcgcagatgaactcgttcaacggatttgccagcaaa 4756
Query: 601 aacactcttgagataaaagtacggttttcaaaagtgatgacaagagcgaattccagacgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4755 aacactcttgagataaaagtacggttttcaaaagtgatgacaagagcgaattccagacgt 4696
Query: 661 tcatcgataagtgggaathatcagcctgctggattatccattagtgccgcaacgccggtt 720
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4695 tcatcgataagtgggaataatcagcctgctggattatccattagtgccgcaacgccggtt 4636
Query: 721 gcttcttcggctccttcccctgctgtgcccacaaaggcaagaaggatgccctcgatgaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4635 gcttcttcggctccttcccctgctgtgcccacaaaggcaagaaggatgccctcgatgaac 4576
Query: 781 aacgtgagakggccatccataacaggttccaatcaatctgcatacagttagaagaaaaga 840
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4575 aacgtgagaaggccatccataacaggttccaatcaatctgcatacagtaagaagaaaaga 4516
Query: 841 gatacaaacccaatgcctgctccaaaagctgtkagaacgcagtcgctgccaatatggaat 900
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4515 gatacaaacccaatgcctgctccaaaagctgttagaacgcagtcgctgccaatatggaat 4456
Query: 901 aatcctggcatcccaagaaattcaatcgctcataagatctacatggctgataggagtwaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4455 aatcctggcatcccaagaaattcaatcgctcataagatctacatggctgataggagtaaa 4396
Query: 961 gagcaaa 967
|||||||
Sbjct: 4395 gagcaaa 4389
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6421
Number of Sequences: 1807
Number of extensions: 6421
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)